OmniPath#

Resources#

`op.collectri`([organism, remove_complexes, ...])	CollecTRI gene regulatory network [MullerDTV+23].
`op.dorothea`([organism, levels, ...])	DoRothEA gene regulatory network [GAHI+19].
`op.hallmark`([organism, license, verbose])	Hallmark gene sets [LSP+11].
`op.progeny`([organism, top, thr_padj, ...])	Pathway RespOnsive GENes for activity inference (PROGENy) [SKK+18].
`op.resource`(name[, organism, license, verbose])	Wrapper to access resources inside Omnipath [TureiKSR16].

`op.show_resources`()	Shows available resources in Omnipath [TureiKSR16].
`op.show_organisms`()	Shows available organisms to translate to with `decoupler.op.translate_net`.
`op.translate`(net[, columns, ...])	Translates gene symbols from human to a target organism using the HCOP database.