decoupler.ds.covid5k

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decoupler.ds.covid5k#

decoupler.ds.covid5k(verbose=False)#

Peripheral blood mononuclear cells (PBMCs) from COVID-19 patients.

Downloads single-cell RNA-seq data of peripheral blood mononuclear cells (PBMCs) from a cohort of patients with and without COVID-19 [SCD+20].

Parameters:

verbose (bool (default: False)) – Whether to display progress messages and additional execution details.

Return type:

AnnData

Returns:

AnnData object.

Example

import decoupler as dc

adata = dc.ds.covid5k()
adata
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