Main
Installation
API
Preprocessing:
decoupler.extract
decoupler.filt_min_n
decoupler.match
decoupler.rename_net
decoupler.get_net_mat
decoupler.break_ties
break_ties()
Methods:
Running multiple methods:
General utils:
AnnData utils:
Omnipath wrappers:
Plotting
Metrics
Benchmark utils
Benchmark
Other
Release notes
Reference
Vignettes
Usage
Cell type annotation from marker genes
Pathway activity inference
Transcription factor activity inference
Functional enrichment of biological terms
Pseudo-bulk functional analysis
Spatial functional analysis
Bulk functional analysis
Benchmarking pipeline
Conversion to other organisms
Licenses in OmniPath databases
decoupler
API
decoupler.break_ties
Edit on GitHub
decoupler.break_ties
decoupler.
break_ties
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